Fortin Honda SL-3 and Compustart CM900 Alarm on after start no unlock from OEM remote

Question

Working on a 2010 Honda Ridgeline. After installing and programing the Fortin Honda SL-3 I was able to pair the device with the OEM Master Key. Everything works great. No issues. Using the Compustar CS1900-S (main brian module number is CM900). At this point the device will only need to start the car. No door lock/unlock needed from the remote start. The idea is to start the car with the remote start, walk to the car use the OEM key fob to unlock it and then take over by turning the key on and pressing the brake pedal. What is happening is now is that when I start the truck with the remote start system the OEM Honda remote will not work anymore to unlock or lock the doors. Also when truck is started with the remote the OEM alarm goes off.